Topics: Spatial registration & normalization

Location: Ogura Lecture Hall (9th floor of the McMillan Building)

Homework:

• Use the Dartel to create a group template off of the dartel-imported gray matter (rc1*) images

• Warp individual subjects’ gray matter (rc1*) to the template using flow fields with 0 smoothing.

Helpful Readings:

Ashburner J (2007) A fast diffeomorphic image registration algorithm. NeuroImage 38:95-113. http://doi.org/10.1016/j.neuroimage.2007.07.007

Klein A, Andersson J, Ardekani BA, Ashburner J, Avants B, Chiang M-C, Christensen GE, Collins DL, Gee J, Hellier P, Song JH, Jenkinson M, Lepage C, Rueckert D, Thompson P, Vercauteren T, Woods RP, Mann JJ, Parsey RV (2009) Evaluation of 14 nonlinear deformation algorithms applied to human brain MRI registration. NeuroImage 46:786-802. http://dx.doi.org/10.1016/j.neuroimage.2008.12.037